Discoverthe bioinformatics chat#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus
#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus

#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus

Update: 2023-08-28
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Description

In this episode,
David Dylus talks about
Read2Tree,
a tool that builds alignment matrices and phylogenetic trees from raw
sequencing reads.
By leveraging the database of orthologous genes called OMA, Read2Tree bypasses traditional, time-consuming steps such as genome assembly, annotation and all-versus-all sequence comparisons.






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#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus

#68 Phylogenetic inference from raw reads and Read2Tree with David Dylus

Roman Cheplyaka