DiscoverThe Nextflow PodcastEpisode 38: Seqera Pipelines & Seqera Containers
Episode 38: Seqera Pipelines & Seqera Containers

Episode 38: Seqera Pipelines & Seqera Containers

Update: 2024-05-28
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Description

Evan Floden (CEO and co-founder of Seqera) joins Phil Ewels (Product Manager for OSS at Seqera) to talk about two of the big announcements at the recent Nextflow Summit Boston 2024 - Seqera Pipelines and Seqera Containers.

We dive into what these two new community offerings are, why we built them and how they work.

Links:





Timeline:


00:00 - Introduction


00:37 - Nextflow Summit Boston 2024


01:14 - Summit talks available online


01:57 - Summit announcements




04:32 - Seqera Pipelines - motivations


05:59 - Seqera Pipelines - first look


06:48 - Testing requirements for community pipelines


10:05 - How we tested pipelines


11:53 - SRA-Explorer tangent




12:34 - Seqera Pipelines - live demo


16:14 - Getting Nextflow launch commands


19:12 - Seqera Containers - intro


24:03 - Seqera Containers - live demo


27:13 - Containers - ARM cpu arch builds


28:33 - Singularity containers


29:09 - Wave CLI


31:19 - Nextflow with Seqera Containers


33:22 - Seqera Containers - future usage




35:09 - Where to read more


36:53 - Thank you to the community

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Episode 38: Seqera Pipelines & Seqera Containers

Episode 38: Seqera Pipelines & Seqera Containers

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