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Spatial Connectomics: Barcodes, Sequencing, and Analysis

Spatial Connectomics: Barcodes, Sequencing, and Analysis

Update: 2025-12-30
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Description

What if we could map every neuron, every connection, and every signal pathway in the brain — not with a microscope, but with DNA barcodes and sequencing?

In this podcast, we explore the groundbreaking field of spatial connectomics, where cutting-edge molecular tools reveal the brain’s wiring diagram at unprecedented resolution.


Each episode uncovers how scientists use DNA barcoding, in situ sequencing, high-throughput imaging, and computational reconstruction to chart the trillions of connections that shape perception, memory, behavior, and disease.


We break down major innovations:

• Barcoded neurons that “tag” their connections

• Molecular tracers that record synaptic events

• Spatial sequencing that reconstructs circuits in 3D

• Machine-learning models that assemble massive neural maps

• Applications in Alzheimer’s, autism, neurodegeneration, and brain-inspired computing


This is the story of how biology, genomics, and advanced computation come together to decode the most complex structure in the known universe — the human brain.

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Spatial Connectomics: Barcodes, Sequencing, and Analysis

Spatial Connectomics: Barcodes, Sequencing, and Analysis

Arghya Ghosh